---
ontology: EDAM (1.12)
topic:
  - Genetic variation
scopes:
  - name: summary
    function:
      - SNP calling
    input:
      - data: Sequence alignment (nucleic acid)
        formats: [FASTA]
    output:
      - data: Alignment
        formats: [FASTA]
      - data: Sequence variations
        formats: [VCF, PHYLIP format]
